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Dot plot

Source: R/geom-dotplot.r
geom_dotplot.Rd

In a dot plot, the width of a dot corresponds to the bin width (or maximum width, depending on the binning algorithm), and dots are stacked, with each dot representing one observation.

Usage

geom_dotplot(
  mapping = NULL,
  data = NULL,
  position = "identity",
  ...,
  binwidth = NULL,
  binaxis = "x",
  method = "dotdensity",
  binpositions = "bygroup",
  stackdir = "up",
  stackratio = 1,
  dotsize = 1,
  stackgroups = FALSE,
  origin = NULL,
  right = TRUE,
  width = 0.9,
  drop = FALSE,
  na.rm = FALSE,
  show.legend = NA,
  inherit.aes = TRUE
)

Arguments

mapping

Set of aesthetic mappings created by aes or aes_. If specified and inherit.aes = TRUE (the default), it is combined with the default mapping at the top level of the plot. You must supply mapping if there is no plot mapping.

data

The data to be displayed in this layer. There are three options:

If NULL, the default, the data is inherited from the plot data as specified in the call to ggplot.

A data.frame, or other object, will override the plot data. All objects will be fortified to produce a data frame. See fortify for which variables will be created.

A function will be called with a single argument, the plot data. The return value must be a data.frame., and will be used as the layer data.

position

Position adjustment, either as a string, or the result of a call to a position adjustment function.

...

other arguments passed on to layer. These are often aesthetics, used to set an aesthetic to a fixed value, like color = "red" or size = 3. They may also be parameters to the paired geom/stat.

binwidth

When method is "dotdensity", this specifies maximum bin width. When method is "histodot", this specifies bin width. Defaults to 1/30 of the range of the data

binaxis

The axis to bin along, "x" (default) or "y"

method

"dotdensity" (default) for dot-density binning, or "histodot" for fixed bin widths (like stat_bin)

binpositions

When method is "dotdensity", "bygroup" (default) determines positions of the bins for each group separately. "all" determines positions of the bins with all the data taken together; this is used for aligning dot stacks across multiple groups.

stackdir

which direction to stack the dots. "up" (default), "down", "center", "centerwhole" (centered, but with dots aligned)

stackratio

how close to stack the dots. Default is 1, where dots just just touch. Use smaller values for closer, overlapping dots.

dotsize

The diameter of the dots relative to binwidth, default 1.

stackgroups

should dots be stacked across groups? This has the effect that position = "stack" should have, but can't (because this geom has some odd properties).

origin

When method is "histodot", origin of first bin

right

When method is "histodot", should intervals be closed on the right (a, b], or not [a, b)

width

When binaxis is "y", the spacing of the dot stacks for dodging.

drop

If TRUE, remove all bins with zero counts

na.rm

If FALSE (the default), removes missing values with a warning. If TRUE silently removes missing values.

show.legend

logical. Should this layer be included in the legends? NA, the default, includes if any aesthetics are mapped. FALSE never includes, and TRUE always includes.

inherit.aes

If FALSE, overrides the default aesthetics, rather than combining with them. This is most useful for helper functions that define both data and aesthetics and shouldn't inherit behaviour from the default plot specification, e.g. borders.

Details

With dot-density binning, the bin positions are determined by the data and binwidth, which is the maximum width of each bin. See Wilkinson (1999) for details on the dot-density binning algorithm.

With histodot binning, the bins have fixed positions and fixed widths, much like a histogram.

When binning along the x axis and stacking along the y axis, the numbers on y axis are not meaningful, due to technical limitations of ggplot2. You can hide the y axis, as in one of the examples, or manually scale it to match the number of dots.

Aesthetics

geom_dotplot understands the following aesthetics (required aesthetics are in bold):

  • x

  • y

  • alpha

  • colour

  • fill

Computed variables

x

center of each bin, if binaxis is "x"

y

center of each bin, if binaxis is "x"

binwidth

max width of each bin if method is "dotdensity"; width of each bin if method is "histodot"

count

number of points in bin

ncount

count, scaled to maximum of 1

density

density of points in bin, scaled to integrate to 1, if method is "histodot"

ndensity

density, scaled to maximum of 1, if method is "histodot"

References

Wilkinson, L. (1999) Dot plots. The American Statistician, 53(3), 276-281.

Examples

ggplot(mtcars, aes(x = mpg)) + geom_dotplot()
#> `stat_bindot()` using `bins = 30`. Pick better value with `binwidth`.
#> Warning: Unit type of dotdia should be 'npc'

ggplot(mtcars, aes(x = mpg)) + geom_dotplot(binwidth = 1.5)
#> Warning: Unit type of dotdia should be 'npc'


# Use fixed-width bins
ggplot(mtcars, aes(x = mpg)) +
  geom_dotplot(method="histodot", binwidth = 1.5)
#> Warning: Unit type of dotdia should be 'npc'


# Some other stacking methods
ggplot(mtcars, aes(x = mpg)) +
  geom_dotplot(binwidth = 1.5, stackdir = "center")
#> Warning: Unit type of dotdia should be 'npc'

ggplot(mtcars, aes(x = mpg)) +
  geom_dotplot(binwidth = 1.5, stackdir = "centerwhole")
#> Warning: Unit type of dotdia should be 'npc'


# y axis isn't really meaningful, so hide it
ggplot(mtcars, aes(x = mpg)) + geom_dotplot(binwidth = 1.5) +
  scale_y_continuous(NULL, breaks = NULL)
#> Warning: Unit type of dotdia should be 'npc'


# Overlap dots vertically
ggplot(mtcars, aes(x = mpg)) + geom_dotplot(binwidth = 1.5, stackratio = .7)
#> Warning: Unit type of dotdia should be 'npc'


# Expand dot diameter
ggplot(mtcars, aes(x = mpg)) + geom_dotplot(binwidth = 1.5, dotsize = 1.25)
#> Warning: Unit type of dotdia should be 'npc'


# \donttest{
# Examples with stacking along y axis instead of x
ggplot(mtcars, aes(x = 1, y = mpg)) +
  geom_dotplot(binaxis = "y", stackdir = "center")
#> `stat_bindot()` using `bins = 30`. Pick better value with `binwidth`.
#> Warning: Unit type of dotdia should be 'npc'


ggplot(mtcars, aes(x = factor(cyl), y = mpg)) +
  geom_dotplot(binaxis = "y", stackdir = "center")
#> `stat_bindot()` using `bins = 30`. Pick better value with `binwidth`.
#> Warning: Unit type of dotdia should be 'npc'
#> Warning: Unit type of dotdia should be 'npc'
#> Warning: Unit type of dotdia should be 'npc'


ggplot(mtcars, aes(x = factor(cyl), y = mpg)) +
  geom_dotplot(binaxis = "y", stackdir = "centerwhole")
#> `stat_bindot()` using `bins = 30`. Pick better value with `binwidth`.
#> Warning: Unit type of dotdia should be 'npc'
#> Warning: Unit type of dotdia should be 'npc'
#> Warning: Unit type of dotdia should be 'npc'


ggplot(mtcars, aes(x = factor(vs), fill = factor(cyl), y = mpg)) +
  geom_dotplot(binaxis = "y", stackdir = "center", position = "dodge")
#> `stat_bindot()` using `bins = 30`. Pick better value with `binwidth`.
#> Warning: Unit type of dotdia should be 'npc'
#> Warning: Unit type of dotdia should be 'npc'
#> Warning: Unit type of dotdia should be 'npc'
#> Warning: Unit type of dotdia should be 'npc'
#> Warning: Unit type of dotdia should be 'npc'


# binpositions="all" ensures that the bins are aligned between groups
ggplot(mtcars, aes(x = factor(am), y = mpg)) +
  geom_dotplot(binaxis = "y", stackdir = "center", binpositions="all")
#> `stat_bindot()` using `bins = 30`. Pick better value with `binwidth`.
#> Warning: Unit type of dotdia should be 'npc'
#> Warning: Unit type of dotdia should be 'npc'


# Stacking multiple groups, with different fill
ggplot(mtcars, aes(x = mpg, fill = factor(cyl))) +
  geom_dotplot(stackgroups = TRUE, binwidth = 1, binpositions = "all")
#> Warning: Unit type of dotdia should be 'npc'
#> Warning: Unit type of dotdia should be 'npc'
#> Warning: Unit type of dotdia should be 'npc'


ggplot(mtcars, aes(x = mpg, fill = factor(cyl))) +
  geom_dotplot(stackgroups = TRUE, binwidth = 1, method = "histodot")
#> Warning: Unit type of dotdia should be 'npc'
#> Warning: Unit type of dotdia should be 'npc'
#> Warning: Unit type of dotdia should be 'npc'


ggplot(mtcars, aes(x = 1, y = mpg, fill = factor(cyl))) +
  geom_dotplot(binaxis = "y", stackgroups = TRUE, binwidth = 1, method = "histodot")
#> Warning: Unit type of dotdia should be 'npc'
#> Warning: Unit type of dotdia should be 'npc'
#> Warning: Unit type of dotdia should be 'npc'

# }